PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538748.1_FGP013
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 26aa    MW: 3017.6 Da    PI: 10.7806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538748.1_FGP013genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH284e-09224830
                       HHHHHHHHHHHHHHHHHCTSCCC CS
                HLH  8 rErrRRdriNsafeeLrellPka 30
                        Er+RR+++N++f  L+ +lP++
  KN538748.1_FGP013  2 SERKRREKLNDSFLALKAVLPPC 24
                       6********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.0E-7124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-8125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.525126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-6224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 26 aa     Download sequence    Send to blast
MSERKRREKL NDSFLALKAV LPPCSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
127ERKRRE
238RKRREK